Running jobs

The Zoo using a PBSPro scheduling system to manage the diverse compute resources.

Using the queue

If you are unfamiliar with using a PBS queue, this tutorial may be useful.

Selecting nodes

The following must be added to your batch script or interative qsub command to ensure the job is started on the correct architecture.

Device	Class	Architecture	Queue command
NVIDIA GTX 1080 Ti	Consumer GPU	Pascal	-lselect=1:ngpus=1:gputype=gtx1080ti
NVIDIA GTX 2080 Ti	Consumer GPU	Turing	-lselect=1:ngpus=1:gputype=gtx2080ti
AMD Radeon VII	Consumer GPU	Vega 20	-lselect=1:ngpus=1:gputype=radeonvii
Intel NUC (Iris Pro 580)	Embedded GPU	Gen9	-lselect=1:ngpus=1:gputype=irispro580
NEC SX-Aurora	Vector Engine	NEC SX	-lselect=1:nacc=1:acctype=aurora
Intel Skylake (12 core)	Server CPU	Skylake Gold	-lselect=1:ncpus=24:cputype=skylake6126
Ampere (32 core)	Server CPU	Armv8	-lselect=1:ncpus=32:cputype=ampere

Additional nodes

The following devices can be made available, but are currently not configured.

Device	Class	Architecture
NVIDIA K20m	HPC GPU	Kepler
NVIDIA K40m	HPC GPU	Kepler
NVIDIA GTX 580	Consumer GPU	Fermi
NVIDIA GTX 680	Consumer GPU	Kepler
NVIDIA GTX 780 Ti	Consumer GPU	Kepler
NVIDIA GTX 980 Ti	Consumer GPU	Maxwell
NVIDIA GTX TITAN X	Consumer GPU	Pascal
AMD S9150	HPC GPU	Hawaii
AMD S10000	HPC GPU	Tahiti
AMD HD7970	Consumer GPU	Tahiti
AMD R9-295X2	Consumer GPU	Hawaii
AMD R9-290X	Consumer GPU	Hawaii
AMD Fury X	Consumer GPU	Fiji
AMD RX 480	Consumer GPU	Polaris
Intel Xeon E5-2697 v2	Server CPU	Ivy Bridge
AMD A10-7850K Radeon R7	APU	Kaveri
Intel Xeon Phi 7210	MIC	KNL
NVIDIA Jetson TX1	ARMv8	Cortex-A57
SoftIron Overdrive 1000	ARMv8	Cortex-A57
Marvell ThunderX2	ARMv8	TX2

Queue configuration

All jobs should be submitted to the default workq queue.